脊髄小脳変性症患者由来iPS細胞の遺伝子解析情報

当室に寄託されている脊髄小脳変性症 / Spinocerebellar degeneration 患者由来iPS細胞について、脊髄小脳変性症関連、8遺伝子領域の反復配列のリピート数を解析した。

対象細胞株:20細胞(20患者)

解析対象遺伝子(関連疾患):ATXN1 (SCA1), ATXN2 (SCA2), ATXN3 (SCA3), CACNA1A (SCA6), ATXN8OS (SCA8), TBP (SCA17), ATN1 (DRPLA), BEAN (SCA31)

解析方法:マルチプレックスPCRによりATXN1, ATXN2, ATXN3, CACNA1A, ATXN8OS, TBP, ATN1の7遺伝子領域におけるリピート数を測定。Repeat Primed PCR によりBEAN遺伝子領域の特定配列のリピート挿入の有無を測定。

結果:

Cell No.AgeSexATXN1 (SCA1)ATXN2 (SCA2)ATXN3 (SCA3)CACNA1A (SCA6)ATXN8OS (SCA8)TBP (SCA17)ATN1 (DRPLA)BEAN (SCA31)other clones derived from the same patient
HPS042550sM26/2819/2214/2413/2327/2936/3913/18normal
HPS046440sM29/3122/2224/7411/1418/3037/3913/17normalHPS0465, HPS0466
HPS046730sF26/2922/2214/7911/1323/2736/3710/11normalHPS0468, HPS0469
HPS057050sM28/2919/2214/1411/1323/2928/377/23normalHPS0571, HPS0572, HPS0573, HPS0574, HPS0575
HPS058260sF29/3122/2214/197/1125/2739/4112/17normalHPS0583, HPS0584, HPS0585, HPS0586, HPS0587
HPS058850sM29/3022/2227/3311/1118/1836/3713/20normalHPS0589, HPS0590, HPS0591, HPS0592, HPS0593
HPS059430sF29/3022/2214/8411/1324/2736/3611/13normalHPS0595, HPS0596, HPS0597, HPS0598, HPS0599
HPS060030sM28/3122/2238/7812/1318/2632/368/17normalHPS0601, HPS0602, HPS0603, HPS0604, HPS0605
HPS060650sF23/2622/2214/7513/1423/2736/3817/17normalHPS0607, HPS0608, HPS0609, HPS0610, HPS0611
HPS077660sM26/2822/2219/2711/1427/2836/3611/13normalHPS0777, HPS0778, HPS0779, HPS0780, HPS0781
HPS080660sF28/3022/4314/2713/1418/3036/3617/18normalHPS0807, HPS0808, HPS0809, HPS0810, HPS0811
HPS083660sM23/2922/2214/1413/1325/2636/3710/15normalHPS0837, HPS0838, HPS0839, HPS0840, HPS0841
HPS103560sM28/2822/2214/1412/1318/2736/3610/15normal
HPS172520sF26/2622/2219/3612/1324/2736/3715/68normal
HPS172620sM26/3022/2214/2613/1324/3236/3711/67normalHPS1727
HPS174040sF26/4522/2214/297/1323/2736/3617/17normal
HPS174160sM29/4322/2214/2712/1324/2736/3617/17normal
HPS188760sM26/2922/2214/1423/2318/2936/3715/17normal
HPS188850sM26/3022/2214/1414/2727/2836/3610/10normalHPS1889
HPS189870sF26/2922/2214/277/1518/1836/3915/19repeat insertedHPS1899



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